BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034C08SP1|AL429876
(891 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig869 1659 0.0
3x_Contig1624 124 3e-28
3x_Contig1503 124 3e-28
3x_Contig1722 122 1e-27
3x_Contig1263 120 5e-27
>3x_Contig869
Length = 2873
Score = 1659 bits (830), Expect = 0.0
Identities = 874/892 (97%), Gaps = 3/892 (0%)
Strand = Plus / Plus
Query: 1 atcaaaaccgaaagtgataaccactacactatacaaccgagattgcatggaagcgtcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 atcaaaaccgaaagtgataaccactacactatacaaccgagattgcatggaagcgtcagt 1098
Query: 61 ttgctgtaggactaggtgttaacaatgcatatcacgaggactactctcagtgctgtcggt 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1099 ttgctgtaggactaggtgttaa-aatgcatatcacgaggactactctcagtgctgtcggt 1157
Query: 121 atatttacatgcccgtaatgatccagttcatttcttagtatataagataccgtggcttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1158 atatttacatgcccgtaatgatccagttcatttcttagtatataagataccgtggcttaa 1217
Query: 181 gtttctactatcatttgttctagacaatccaatattagatcagtctcacgatatctcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1218 gtttctactatcatttgttctagacaatccaatattagatcagtctcacgatatctcttt 1277
Query: 241 ctatcaaaggaattgcggtacattttagtccccttctttccataatatccgtgggtctga 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1278 ctatcaaaggaattgcggtacattttagtccccttctttccataatatccgtggatctga 1337
Query: 301 tgaaaccatatcttcctkgatttgactgatagcttctctccatattttgttaatagttca 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1338 tgaaaccatatcttccttgatttgactgatagcttctctccatattttgttaatagttca 1397
Query: 361 aatactgcagtgggaaaaaaawcttccgaactatatgawgttcgtttaacccattccgga 420
||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 1398 aatactgcagtggtaaaaaaatcttccgaactatatgatgttcgtttaacccattccgga 1457
Query: 421 cagaatttctgtggagccagttactgtccttgkkcggaataaaawttcctagccccgcta 480
||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 1458 cagaatttctgtgga-ccagttactgtccttgttcggaataaaatttcctagccccgcta 1516
Query: 481 gtttcatttgtctaattaagcagkagatccatctgtcaaactagtactctgacttcacta 540
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1517 gtttcatttgtctaattaagcagtagatccatctgtcaaactagtactctgacttcacta 1576
Query: 541 cttctagataaacacgaggccttgtcttggaacccgggaragctttgaaacctttatacg 600
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1577 cttctagataaacacgatgccttgtcttggaacccgggaaagctttgaaacctttatacg 1636
Query: 601 gagttgcataatattccttttcctcattggtgattctggacatccaaatcacgtgakacc 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1637 gagttgcataatattccttttcctcattggtgattctggacatccaaatcacgtgatacc 1696
Query: 661 aattcaaaaccttcagtatgtgatgaatccatatctcacagtatcttgtatcatctatca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1697 aattcaaaaccttcagtatgtgatgaatccatatctcacagtatcttgtatcatctatca 1756
Query: 721 ttaatgcaaataggtaaataagtctaaacagggtctatgggcttatttacgcggggka-c 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 1757 ttaatgcaaataggtaaataagtctaaacagggtctatgggcttatttacgcggggtacc 1816
Query: 780 cacggcacaccgagttgactgggaaatcgctccacacgcaagcttcctctcggtagccaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1817 cacggcacaccgagttgactgggaaatcgctccacacgcaagcttcctctcggtagccaa 1876
Query: 840 gttggtttaargcgccagactgttatttgaaaacacaaagcaatttgtaatc 891
|||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1877 gttggtttaaggcgccagactgtaatttgaaaacacaaagcaatttgtaatc 1928
>3x_Contig1624
Length = 12551
Score = 124 bits (62), Expect = 3e-28
Identities = 66/68 (97%)
Strand = Plus / Minus
Query: 824 tcctctcggtagccaagttggtttaargcgccagactgttatttgaaaacacaaagcaat 883
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 6094 tcctctcggtagccaagttggtttaaggcgccagactgtaatttgaaaacacaaagcaat 6035
Query: 884 ttgtaatc 891
||||||||
Sbjct: 6034 ttgtaatc 6027
>3x_Contig1503
Length = 10719
Score = 124 bits (62), Expect = 3e-28
Identities = 66/68 (97%)
Strand = Plus / Minus
Query: 824 tcctctcggtagccaagttggtttaargcgccagactgttatttgaaaacacaaagcaat 883
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 3592 tcctctcggtagccaagttggtttaaggcgccagactgtaatttgaaaacacaaagcaat 3533
Query: 884 ttgtaatc 891
||||||||
Sbjct: 3532 ttgtaatc 3525
>3x_Contig1722
Length = 17718
Score = 122 bits (61), Expect = 1e-27
Identities = 65/67 (97%)
Strand = Plus / Minus
Query: 825 cctctcggtagccaagttggtttaargcgccagactgttatttgaaaacacaaagcaatt 884
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 5777 cctctcggtagccaagttggtttaaggcgccagactgtaatttgaaaacacaaagcaatt 5718
Query: 885 tgtaatc 891
|||||||
Sbjct: 5717 tgtaatc 5711
>3x_Contig1263
Length = 6840
Score = 120 bits (60), Expect = 5e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 826 ctctcggtagccaagttggtttaargcgccagactgttatttgaaaacacaaagcaattt 885
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 5478 ctctcggtagccaagttggtttaaggcgccagactgtaatttgaaaacacaaagcaattt 5537
Query: 886 gtaatc 891
||||||
Sbjct: 5538 gtaatc 5543
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5217
Number of Sequences: 1807
Number of extensions: 5217
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 5
length of query: 891
length of database: 10,358,551
effective HSP length: 16
effective length of query: 875
effective length of database: 10,329,639
effective search space: 9038434125
effective search space used: 9038434125
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)